obot session hub · session report

Session 2026-07-17 · obot2

● LiveReport generated 6:36 PM
Priorities7 open · 1 donescratchpad kickoff list
Agents41 blocked · 3 done
Tokens1210.7kacross 4 reporting sessions
Closure63 merged · 2 closed · 1 released

Accomplishments

derived: releases + requirement issues + closures since session start
🚀 safety.viz v1.4.0 released
▸✅ 3 PRs merged · 2 issues closed
safety.viz#69 hepExplorer: composite plot for subjects with abnormal baseline liver tests (#67) ✓ merged
safety.viz#74 Docs site: GitHub mark icon + 🍊😺 emoji in the header nav (not words) ✓ merged
safety.viz#75 Release v1.4.0: QT Safety Explorer, hep composite plot, Gallery dropdown ✓ merged
safety.viz#67 hepExplorer: composite plot for subjects with abnormal baseline liver tests (baseline-referenced eDISH) ✓ closed
safety.viz#73 Docs site: show GitHub mark icon in the header nav (not the word) ✓ closed

Priorities

scratchpad · ## Overview — click a row for detail

Session redefined by Jeremy's kickoff ask: a colleague sent 5 improvement ideas → build an artifact breaking them into actionable requirements + high-level feasibility assessment for each. That is the session focus; the carried gate list below sits under it.

Agent-actionable
▸1Feasibility artifact (session focus) — 5 ideas: Hep-explorer composite-plot for baseline-abnormal DILI (Hayashi, Drug Safety 2024); finish Renal explorer (import/mapping/suite-integration/on-the-fly eGFR+ACR+BUN:Cr — ties hub #35); QT explorer (CSRC mockup+workflow, greenfield); Benefit-Risk tools (Forest+Value Tree, gated on ASA taskforce spec); recurrent-AE analysis (wish list, quick wins flagged). NOTE: referenced attachments did NOT reach this bg job — assessment is domain-knowledge-based, source-review flagged.
Feasibility artifact (session focus) — 5 ideas: Hep-explorer composite-plot for baseline-abnormal DILI (Hayashi, Drug Safety 2024); finish Renal explorer (import/mapping/suite-integration/on-the-fly eGFR+ACR+BUN:Cr — ties hub #35); QT explorer (CSRC mockup+workflow, greenfield); Benefit-Risk tools (Forest+Value Tree, gated on ASA taskforce spec); recurrent-AE analysis (wish list, quick wins flagged). NOTE: referenced attachments did NOT reach this bg job — assessment is domain-knowledge-based, source-review flagged.
▸2gsm.safety RC1 to the gate (carried 4×) — verify gs#40 sync in gs PR#39, close #40 → Jeremy's merge+tag gate (hub #28)
gsm.safety RC1 to the gate (carried 4×) — verify gs#40 sync in gs PR#39, close #40 → Jeremy's merge+tag gate (hub #28)
▸3Roadmap recon + evidence follow-ups (autonomy grant) — sv re-milestones + close v1.2.0; hep-explorer matrix (evidence pages IDs-only without it); ae-explorer gallery PNG refresh; board hygiene
Roadmap recon + evidence follow-ups (autonomy grant) — sv re-milestones + close v1.2.0; hep-explorer matrix (evidence pages IDs-only without it); ae-explorer gallery PNG refresh; board hygiene
▸4Post #7 outline "Anatomy of a Session" (hub #22)
Post #7 outline "Anatomy of a Session" (hub #22)
Waiting on @jwildfire
▸5nepExplorer D1–D3 (demo data, phasing, animation) — assessment / hub #35; gates Data Requirement + Design
nepExplorer D1–D3 (demo data, phasing, animation) — assessment / hub #35; gates Data Requirement + Design
▸6Merge gates — gs PR#39 (after item 2); og PR#1; oa PR#28; hub #24 close-out sign-off
Merge gates — gs PR#39 (after item 2); og PR#1; oa PR#28; hub #24 close-out sign-off
▸7Decisions — hub #34 D1–D6; hub #18 Q1–Q4; keynote K2–K4; drop stale dist/safety.viz-1.3.0 bundle from main (deletion)
Decisions — hub #34 D1–D6; hub #18 Q1–Q4; keynote K2–K4; drop stale dist/safety.viz-1.3.0 bundle from main (deletion)
▸8Installs & external — obotclaw app on open.gismo + jwildfire.github.io; Gilead gsm.roadmap PR#151; hub #3 §7 credential retirement; LinkedIn post
Installs & external — obotclaw app on open.gismo + jwildfire.github.io; Gilead gsm.roadmap PR#151; hub #3 §7 credential retirement; LinkedIn post

▸Roadmap activity

5 events · gh sweep, all events
safety.viz#67 hepExplorer: composite plot for subjects with abnormal baseline liver tests (baseline-referenced eDISH) — closed
safety.vizPR #69 hepExplorer: composite plot for subjects with abnormal baseline liver tests (#67) — merged
safety.viz#73 Docs site: show GitHub mark icon in the header nav (not the word) — closed
safety.vizPR #74 Docs site: GitHub mark icon + 🍊😺 emoji in the header nav (not words) — merged
safety.vizPR #75 Release v1.4.0: QT Safety Explorer, hep composite plot, Gallery dropdown — merged

Agents

state.json + claude agents — P# links to the priority
▸lead?blocked
diary draft ready for review; awaiting approval to post
11:13 AM–6:31 PM (7h 18m) 473.9k tok opus-4-8
claude.ai/code/artifact/5acf4da2-26e3-4e14-bb83-94e3a3f481ca PR jwildfire.github.io#9 PR safety.viz#75
😺🤖 2026-07-17
▸qt-explorer-p1✓done
PR #70 merged to dev with evidence baselines refreshed; Phase 2 requirement filed as obot.roadmap#37 with 6 feature candidates
1:24 PM–5:22 PM (3h 58m) 507.0k tok opus-4-8
PR safety.viz#70
⚡️🤖 qt-explorer-p1
▸composite-select✓done
PR #69 merged to dev; composite plot with multi-select + shared header now live at jwildfire.github.io/safety.viz/dev/hep-explorer
3:52 PM–5:55 PM (2h 2m) 161.7k tok fable
PR safety.viz#69
👯🤖 2026-07-17 composite-select
▸gh-icon-headers✓done
PR #74 merged to dev (commit 29ce194); GitHub icon + 🍊😺 live at jwildfire.github.io/safety.viz/dev
5:33 PM–6:05 PM (33m) 68.1k tok opus
PR safety.viz#74
👯🤖 2026-07-17 gh-icon-headers

▸Todo

1 · scratchpad · ## Todo
  • Roll the always-visible view-option-list nav (shipped on hep-explorer PR#69 and qt-explorer PR#70, per Jeremy) out to the other renderers: safety-histogram, ae-explorer, ae-timelines, etc. Note: those charts have no "View" control today — this means promoting their display-mode-style switches (or adding view nav) to the stacked-button pattern, likely as a shared shell builder once #69/#70 merge (both currently duplicate module-scoped CSS).

▸Notes

1 · scratchpad · ## Notes
  • Referenced attachments (Hayashi Drug Safety 2024 paper, renal clinical workflow, QT Tool Display v2, Draft Clinical Workflow 28Apr2025) NOT present on disk in this bg job — only existing HepExplorerWorkflow_v1_2_1.pdf. Feasibility built from Jeremy's descriptions + domain knowledge + hub #35 nepExplorer assessment; every source-specific claim flagged "pending source review."

▸Scaffold

0 · scratchpad · ## Scaffold

▸Next session

memory + last diary
Set at the 2026-07-17 wrapup (the big feature-and-release day: 5-idea assessment → QT Explorer P1 + hep composite + gallery dropdown + header icons all built by 4 parallel bg agents → safety.viz v1.4.0 released; blog #7 outline drafted). Supersedes the 07-15 list. Checkpoint: draft-post review page, approved with no comments — so the 4 open questions below stayed unanswered and carry. 1. Blog Diary #7 MAJOR REWRITE (Jeremy-directed, top priority) — the hep-explorer composite-plot post. Reframe the outline from technical-spec into a first-person dev-diary STORY: lead with the Jim Buchanan conversation + the one-session collaboration arc; trim/compress the dense FDA composite-method beats; shorter, higher-altitude. Keep the verified facts/links block as BACKING not body; preserve the verbatim lede (2 typo fixes), the embedded gif, and the already-filled tokens/$ + Opus-4.8 correction. Re-point the gif + links to the PRODUCTION hep-explorer URL (the pr/69 preview was torn down when #69 merged). Resolve the #7 numbering (was reserved for "Anatomy of a Session"). Deliverable STAYS AN OUTLINE (Jeremy writes prose). Assets: draft + gif on branch draft/hep-explorer-composite-plot, blog PR #9; render script ~/.claude/jobs/ddd2bd7b/tmp/render_preview.py. (hub #22) 2. 4 open wrapup questions (unanswered — ask Jeremy): - v1.4.0 milestone — create it + backfill sv#67/#68/#71/#73 for a clean release page? - hub #36 phased status — QT Phase 1 is released, Phase 2 (#37) pending; I set the board to Development as a non-overclaiming default — Jeremy to finalize (e.g. "Released" for P1 with #37 tracking P2). - Fable-5 attribution sweep — hub #36 + sv#68 still say "drafted by … Fable 5" (all bg work was actually Opus 4.8, see [[model-allocation-grant]]) — sweep them? - View-selector rollout — promote the always-visible view-option button pattern (now on qt-explorer + hep-explorer) to the other renderers as a shared shell builder; needs a hub requirement if it becomes a priority (currently a scratchpad todo only). 3. Carried gates (agent-actionable): - gsm.safety RC1 to the gate (hub #28) — verify gs#40 sync in gs PR #39 (re-check the safety.viz pin — now v1.4.0), close #40 → then purely Jeremy's merge+tag gate. Carried 4×+ — do first among the carries. - Roadmap recon + evidence follow-ups (autonomy grant) — author a hep-explorer requirement matrix (evidence pages still degrade to IDs-only without one — the composite plot just added HEP-COMP rows); sv re-milestones + close shipped milestones; ae-explorer gallery PNG refresh; board hygiene. - nepExplorer (hub #35) — gated on Jeremy's D1–D3 (demo data, phasing, animation); then Data Requirement + Design. Proposed scaffold (needs Jeremy's nod, NOT applied): a safety.viz-release skill capturing the release flow done 5× by hand now (bump dev→ver + vendor dist → release PR dev→main → CI green → Jeremy clicks the protected-main merge (auto-mode classifier gates it) → tag via gh release create --target main → cleanup worktrees + ff local main → stamp draft → Requirements delivered: line). Notes reviewed on a rendered Chrome page first. Standing Jeremy gates/decisions: og PR#1, oa PR#28, hub #24 close-out; drop stale dist/safety.viz-1.3.0 bundle from main (deletion); decisions hub #34 D1–D6, hub #18 Q1–Q4 (stalest), keynote K2–K4; obotclaw installs (open.gismo + jwildfire.github.io); Gilead gsm.roadmap PR#151; hub #3 §7 credential retirement; LinkedIn post; stale obot.roadmap/.claude/worktrees/24-design-doc worktree.
last diary (2026-07-17.md)
- Blog Diary #7 major rewrite (@jwildfire-directed): dev-diary story voice, higher altitude, facts as backing; keep the verbatim lede, gif, and the filled tokens/$ + Opus-4.8 correction. Re-point the gif to production. Resolve the #7 numbering (was reserved for "Anatomy of a Session"). (blog PR #9, hub #22)
- View-selector rollout (queued todo): promote the always-visible view-option button pattern (now on qt-explorer and hep-explorer) to the other renderers as a shared shell builder — needs a requirement if it becomes a priority.
- Carried gates: gsm.safety RC1 to the gate (gs#40 / gs PR #39, hub #28); nepExplorer D1–D3 (hub #35); open decisions (hub #34, hub #18, keynote K2–K4).
frozen operational record · pairs with diary/2026-07-17.md · boundary: session-init marker @ 17:20 (5:20 PM) · session-hub (obot.agent v0.2 · #24)