obot session hub · session report

Session 2026-07-28 · obot2

● LiveReport generated 7:45 AM
Priorities0 open · 0 donescratchpad kickoff list
Agents91 blocked · 7 done · 1 working
Tokens2828.5kacross 9 reporting sessions
Closure76 merged · 1 closed · 0 released

Accomplishments

derived: releases + requirement issues + closures since session start
📋 hub#140 Requirement: one write-policy decision per repo — unify merge tiers and autonomy grants into profiles opened
6 PRs merged · 1 issues closed
obot.agent#59 Add demo-301 to merge-policy.json at the standard tier ✓ merged
demo-301#1 Run the safety metrics, and merge the chart phase into 4_modules ✓ merged
obot.agent#61 One write-policy decision per repo: unify merge tiers and autonomy grants into profiles ✓ merged
obot.agent#64 Add /session-idea and /session-reviews, and short /s-* aliases for the session-command family ✓ merged
obot.agent#71 session-wrapup: file actionable blockers and risks as tracked issues ✓ merged
obot.agent#72 session-wrapup: every documented risk carries a proposed mitigation ✓ merged
obot.agent#60 obot-auto: the autonomy-halt kill switch is not found when run from a linked worktree ✓ closed

Priorities

scratchpad · ## Overview — click a row for detail

Roadmap activity

21 events · gh sweep, all events
open.gismoPR #4 Lead RBQM with the sites that need attention, and give the study real QTLs — updated
obot.agentPR #59 Add demo-301 to merge-policy.json at the standard tier — merged
demo-301PR #1 Run the safety metrics, and merge the chart phase into 4_modules — merged
obot.agentPR #62 Add gsm.qtl report_qtl.yaml upstream audit drafts — opened
obot.agentPR #63 Remote Control: fix the obot-auto lane, verify the global setting, document the lane that was actually broken — opened
obot.agent#54 obot-auto: spawn the --auto lead with --remote-control — updated
obot.agentPR #61 One write-policy decision per repo: unify merge tiers and autonomy grants into profiles — merged
obot.agent#60 obot-auto: the autonomy-halt kill switch is not found when run from a linked worktree — closed
obot.agent#65 obot-merge does not enforce the policy carve-out: a PR rewriting policy.json merges on the standard lane — opened
obot.agentPR #64 Add /session-idea and /session-reviews, and short /s-* aliases for the session-command family — merged
obot.agent#66 session-wrapup: refresh the analytics usage data at post time — opened
obot.agentPR #67 session-wrapup: refresh the analytics usage data at post time — opened
obot.agent#68 Worktree layout: sibling {repo}-worktrees/ dirs trigger permission-root prompts in unattended sessions — opened
obot.agentPR #69 Relocate linked worktrees to {repo}/.claude/worktrees/ (ends permission-root prompts) — opened
obot.roadmap#140 Requirement: one write-policy decision per repo — unify merge tiers and autonomy grants into profiles — opened
obot.agentPR #71 session-wrapup: file actionable blockers and risks as tracked issues — merged
obot.roadmap#144 Blinding is a per-module property, not an app-wide one — opened
obot.roadmap#142 Agent-derived clinical thresholds need human sign-off before we claim conformance — opened
obot.roadmap#143 demo-301's published site branch is ~302MB — revisit before it is the fork template — opened
obot.agent#70 Parallel siblings share one R library and silently clobber each other's installs — opened
obot.agentPR #72 session-wrapup: every documented risk carries a proposed mitigation — merged

Agents

state.json + claude agents — P# links to the priority
lead?blocked
rbqm-overviewdone
open.gismo PR #4 merged; demo-301 live at jwildfire.github.io/demo-301; obot.agent #63 (remote-control fix) ready to review; #62 (gsm.qtl audit) draft awaiting filing
10:26 PM–6:58 AM (8h 33m) 222.9k tok opus
👯🤖 2026-07-28 rbqm-overview
safety-metricsworking
snapshots published (cut 1+2); policy-unify job running at approval gate
10:26 PM–6:41 AM (8h 16m) 231.1k tok opus
👯🤖 2026-07-28 safety-metrics
qtl-upstream-auditdone
GSM QTL audit report shipped: hub live, PR #62 draft with findings + repro scripts + logs
5:51 AM–6:56 AM (1h 5m) 106.3k tok opus
👯🤖 2026-07-29 qtl-upstream-audit
policy-unifydone
migration complete (80/80 verdicts identical, drift repos promoted to auto, obot.agent#65 filed)
5:55 AM–6:44 AM (49m) 87.1k tok opus
👯🤖 2026-07-29 policy-unify
rc-debugdone
PR #63: added --remote-control flag to obot-auto; elevated spawn bridge check to step 5 + triage table in remote-control.md
6:06 AM–6:42 AM (36m) 50.9k tok opus
👯🤖 2026-07-29 rc-debug
session-commandsdone
PR #64 merged to obot.agent main; s-* aliases and session-idea/session-reviews skills now available
6:11 AM–6:48 AM (37m) 94.2k tok opus
👯🤖 2026-07-29 session-commands
analytics page refresh scheduledone
Analytics page refreshed through 07-29 (deploy green); wrapup-as-heartbeat shipped as obot.agent#66 + draft PR#67 awaiting Jeremy's merge approval.
6:58 AM–7:19 AM (20m) 22.3k tok fable
worktree permission standardizationdone
Worktree layout standardized on {repo}/.claude/worktrees/ (CLAUDE.md override live now + obot.agent PR #69 draft, issue #68) — ends the recurring permission-root relocation clicks in unattended sessions.
7:19 AM–7:26 AM (8m) 28.8k tok

Notes

0 · scratchpad · ## Notes

⚠ no ## Notes section in today’s scratchpad

Scaffold

0 · scratchpad · ## Scaffold

⚠ no ## Scaffold section yet — capture with "scaffold: …"

Next session

memory + last diary
Written at the 2026-07-28 session-2 wrapup (job f1e062e6; autonomous --auto run, directed focus "build the nep-explorer"; diary 2026-07-28-2). Supersedes the 07-27 session-2 list — its agent items (#132 tail, #133, open.csr#22) were not worked and carry forward unchanged. The new blocker, and the session's main output: hub#35 (nepExplorer) advanced through Data Requirement + Design and now sits at Jeremy's review gate with D4–D9 open. Nothing else about nepExplorer can move until those are signed: the drafted safety.viz Phase-1 issue is held local-only (.github/drafts/safety.viz/ISSUE_N_nep-phase1.md) because three of the six decisions change its scope. Design doc: <https://jwildfire.github.io/obot.roadmap/requirements/design/35_design.html>. See [[nep-explorer-workstream]] for the measured findings — the headline is that current demo data cannot demo the chart (max fold change 1.455×, zero above the 1.5× line), which is what D8 turns on, and D8 collides with safety.viz#89's one-dataset goal. Agent-actionable: 1. hub#132 tail (Development, under goal #73): apply the proposal's repo-issue edges (open.csr#1/#2→#111, open.csr#14→#113, sv#89→#25, sv#104→#37, oa#32→#24, oa#36→#123, oa#37/#54→#18), place #44/#94→#31, #83→#88, #81→#2, retire applied entries from scripts/roadmap-proposal.json. 2. hub#133 GOALLESS transitive-ancestor walk + rule test (auto — autonomous-eligible). 3. CSR arc: hub#131 study-repo design questions → open.csr#22 CR composer — goal #112, parent #130. 4. New scaffold issues, both small: oa#57 sibling heartbeat lines land at EOF under ## Scaffold instead of ## Session log (second occurrence; fix = a helper that inserts above ## Todo and stamps its own time) · oa#58 merge-gate-guard matches its trigger phrase inside quoted prose, blocking spawns whose briefing merely describes the policy. 5. Carried: open.csr#14 pages race · sv#54/#55 · hub#122/#123 drafting · oa#32/#36/#37/#54. Jeremy's queue: 1. Sign off #35 D4–D9 — unblocks a clean one-session nepExplorer Phase-1 build. D8 (which demo dataset) needs his judgment most. 2. Drive the audit queue (node obot.agent/tools/session-hub/session-audit.mjs --open): OPEN-IN-RELEASED ×4 = the #2/#3/#21/#129 close calls. 3. Reviews: the two 07-28 app-design artifacts (goal #79, from the morning session) · sv#119 draft · oa#52 · #127/#128 · #114 D3/D4/D5 · #58 close · unreviewed 07-27 and 07-28-2 --auto diaries. 4. Confirm keynote goal #72 stays registry-less (display-only per 07-25). Known gaps from this session: the morning session (job 96636d0f) ended without a wrapup, so today has no 2026-07-28.md diary — its two artifacts live only in the shared scratchpad. A Pages deploy hung ~15 min on r-lib/actions/setup-r@v2 and had to be cancelled (bot token lacks Actions write; user token needed) — watch for a repeat. Related: [[nep-explorer-workstream]], [[roadmap-audit-framework]], [[goals-as-issues]], [[open-csr-workstream]], [[keynote-plan]].
last diary (2026-07-28.md)
1. Review the overnight build in Chrome — the RBQM overview, the Safety page and the case-review queue are all live but unreviewed; the three-state acceptable-ranges panel is the piece most worth a look.
2. Triage the four new risk trackers (#142/#143/#144/obot.agent#70), all filed to Backlog; and #134's stage move is @jwildfire's call now that demo-301 v0 has substantially shipped.
3. Finish the gsm.qtl upstream hand-offobot.agent#62 carries the audit drafts for the three genuine defects (two of the original five were retracted after re-measuring); the drafts still need to reach Gilead-BioStats, which is outside the org and therefore yours to post.
4. #139 action log — filed to backlog; D1 (where mutable review state persists without breaking snapshot immutability) is the question that unlocks it.
5. Carried from before: safety.viz#121 nep-explorer Phase 1 draft PR · sv#119 · oa#52 · hub #127/#128 · the OPEN-IN-RELEASED close calls (#2/#3/#21/#129).
frozen operational record · pairs with diary/2026-07-28.md · boundary: no marker → local midnight (12:00 AM) · session-hub (obot.agent v0.2 · #24)