obot session hub · session report

Session 2026-07-19 · obot2

● LiveReport generated 10:03 AM
Priorities6 open · 4 donescratchpad kickoff list
Agents22 blocked
Tokens173.0kacross 2 reporting sessions
Closure10 merged · 1 closed · 0 released

Accomplishments

derived: releases + requirement issues + closures since session start
📋 hub#35 Requirement: nepExplorer migration — KDIGO kidney-safety explorer for safety.viz updated
📋 hub#18 Requirement: autonomous obot operations — scheduled and event-driven agent runs updated
📋 hub#36 Requirement: QT Safety Explorer — ICH-E14 cardiac-safety renderer for safety.viz updated
📋 hub#41 Requirement: Shared view selector — always-visible view options across safety.viz renderers updated
▸✅ 0 PRs merged · 1 issues closed
safety.viz#77 Docs site: matrixBaseUrl points to the old safety.agent repo name (now obot.agent) ✓ closed

Priorities

scratchpad · ## Overview — click a row for detail

Review-backlog artifact (deliverable, published): claude.ai/code/artifact/a9076f19-2eaf-4541-9113-b15f8088b41b

Agent-actionable
▸1Fix gs PR#39 CI — 2 red checks, both infra: stale workflow templates ("Fail check if updates required") + oldrel R 4.3.3 dependency-install failure; release R passes on all 3 OSes (gs PR#39)
Fix gs PR#39 CI — 2 red checks, both infra: stale workflow templates ("Fail check if updates required") + oldrel R 4.3.3 dependency-install failure; release R passes on all 3 OSes (gs PR#39)
▸2Post-merge follow-ups EXECUTED at wrapup (both merges fired the trigger): extracts regen + sv#77 fix in obotclaw commit 12dd2af on dev — hep 33 / qt 18 requirement texts live on the dev tier, prod at next release. Hub #41: evidence comment posted, board moved to Released; final close is on Jeremy's list.
Post-merge follow-ups EXECUTED at wrapup (both merges fired the trigger): extracts regen + sv#77 fix in obotclaw commit 12dd2af on dev — hep 33 / qt 18 requirement texts live on the dev tier, prod at next release. Hub #41: evidence comment posted, board moved to Released; final close is on Jeremy's list.
▸3Board hygiene candidate: move hub #28 Development→Review once gs#39 CI is green (autonomy grant)
Board hygiene candidate: move hub #28 Development→Review once gs#39 CI is green (autonomy grant)
▸43a. QUEUED from decisions (approved 07-19, run overnight/idle): safety.viz-release skill draft (+e2e-fixture bump step); open.gismo plan-report+#34 update to ratified D1/D2/D6 (+resolve D3/D4 in draft) then Phase 1–4 hub Requirements for approval; nep #35 pre-flight (Design section + sv impl issue) → ⚡️ Phase-1 KDIGO scatter after backlog clears; #18 Design section draft (3 lanes, GHA/obotclaw, gates+kill switches); K4 per-repo standing-grant definitions to propose
3a. QUEUED from decisions (approved 07-19, run overnight/idle): safety.viz-release skill draft (+e2e-fixture bump step); open.gismo plan-report+#34 update to ratified D1/D2/D6 (+resolve D3/D4 in draft) then Phase 1–4 hub Requirements for approval; nep #35 pre-flight (Design section + sv impl issue) → ⚡️ Phase-1 KDIGO scatter after backlog clears; #18 Design section draft (3 lanes, GHA/obotclaw, gates+kill switches); K4 per-repo standing-grant definitions to propose
Waiting on @jwildfire
▸4sv PR#78 MERGED by Jeremy 12:41 UTC (minutes after the artifact published); sv#76 auto-closed
sv PR#78 MERGED by Jeremy 12:41 UTC (minutes after the artifact published); sv#76 auto-closed
▸5oa PR#28 MERGED by Jeremy 12:40 UTC; extracts follow-up executed (item 2)
oa PR#28 MERGED by Jeremy 12:40 UTC; extracts follow-up executed (item 2)
▸6Blog #9 direction — title + direction + #7-vs-#8 numbering (PR#9)open-blog-pr9
Blog #9 direction — title + direction + #7-vs-#8 numbering (PR#9)
▸7gs PR#39 review now, merge+tag after CI fix (PR#39, evidence)
gs PR#39 review now, merge+tag after CI fix (PR#39, evidence)
▸8Decisions — ALL CLEARED 2026-07-19 interactive session (5 AskUserQuestion rounds): #36→Released (board flipped); sv-release skill=BUILD; v1.4.0 milestone=DONE (created+backfilled+closed); nep #35 D1=RhoInc+eGFR/D2=P1 standalone/D3=defer, ⚡️ queued next; #34 D1=GitHub prerequisite/D2=fork+upstream/D6=Snapshots in v1, plan-update-first (D3/D4 still open — fold into plan draft); #18 lanes=rollup+responder+dev (diary OUT), runtime=GHA/obotclaw, carry harness pieces, → Design; keynote K2=fork+upstream/K3=forkable demo-study repo/K4=wider standing per-repo grants. Records: #34 · #35 · #18 · #36
Decisions — ALL CLEARED 2026-07-19 interactive session (5 AskUserQuestion rounds): #36→Released (board flipped); sv-release skill=BUILD; v1.4.0 milestone=DONE (created+backfilled+closed); nep #35 D1=RhoInc+eGFR/D2=P1 standalone/D3=defer, ⚡️ queued next; #34 D1=GitHub prerequisite/D2=fork+upstream/D6=Snapshots in v1, plan-update-first (D3/D4 still open — fold into plan draft); #18 lanes=rollup+responder+dev (diary OUT), runtime=GHA/obotclaw, carry harness pieces, → Design; keynote K2=fork+upstream/K3=forkable demo-study repo/K4=wider standing per-repo grants. Records: #34 · #35 · #18 · #36
▸9Admin — obotclaw installs (open.gismo + jwildfire.github.io); Gilead PR#151; hub #3 §7; LinkedIn; deletions approval; gs PR#29 stale-draft triage
Admin — obotclaw installs (open.gismo + jwildfire.github.io); Gilead PR#151; hub #3 §7; LinkedIn; deletions approval; gs PR#29 stale-draft triage

▸Roadmap activity

12 events · gh sweep, all events
obot.roadmap#34 Design discussion: GitHub's role in open.gismo v1.0 (D1/D2/D6) — updated
obot.roadmap#35 Requirement: nepExplorer migration — KDIGO kidney-safety explorer for safety.viz — updated
obot.roadmap#18 Requirement: autonomous obot operations — scheduled and event-driven agent runs — updated
obot.roadmap#36 Requirement: QT Safety Explorer — ICH-E14 cardiac-safety renderer for safety.viz — updated
safety.viz#67 hepExplorer: composite plot for subjects with abnormal baseline liver tests (baseline-referenced eDISH) — updated
safety.viz#68 QT Explorer (Phase 1): central-tendency + outlier scatter + categorical tables — updated
safety.viz#71 Top nav: expand the "Gallery" link into a charts dropdown — updated
safety.viz#73 Docs site: show GitHub mark icon in the header nav (not the word) — updated
jwildfire.github.ioPR #9 Draft: R/Pharma Diary #7 — hep-explorer composite plot (outline for review) — updated
safety.viz#77 Docs site: matrixBaseUrl points to the old safety.agent repo name (now obot.agent) — closed
obot.roadmap#41 Requirement: Shared view selector — always-visible view options across safety.viz renderers — updated
safety.vizPR #78 Shared view-selector shell builder + suite-wide rollout (VIEW-1..VIEW-4) — updated

Agents

state.json + claude agents — P# links to the priority
▸lead?blocked
wrapup checkpoint staged; awaiting approval decision
8:27 AM–10:01 AM (1h 35m) 114.7k tok fable
claude.ai/code/artifact/a9076f19-2eaf-4541-9113-b15f8088b41b
😺🤖 2026-07-19
▸open-blog-pr9P6?blocked
Hepatic + QT Safety sections drafted with verified costs; preview at 127.0.0.1:8788/diary7-preview-v3.html
8:42 AM–9:31 AM (48m) 58.3k tok sonnet
👯🤖 2026-07-19 open-blog-pr9

▸Notes

1 · scratchpad · ## Notes
  • Delta sweep 2026-07-19 morning: nothing merged/closed overnight, no new items. ONE change vs hand-off: gs PR#39 CI rollup FAILURE (2 red: check-workflows template drift + ubuntu R 4.3.3 "Install R and dependencies"; macOS/windows/ubuntu release R all pass). sv#78 preview /pr/78/ = 200; RC1 evidence bundle = 200. gs#40 confirmed closed. Board oddity: gs PR#29 stale codex draft in Review stage since 06-07.

▸Scaffold

0 · scratchpad · ## Scaffold

▸Next session

memory + last diary
Set at the 2026-07-19 wrapup (live session; Jeremy approved via checkpoint page: "Yes - push updates on blog draft"). The morning cleared the review backlog: artifact → Jeremy merged sv#78 + oa#28 within minutes; all 7 carried decisions resolved in 5 AskUserQuestion rounds; follow-ups executed at wrapup (extracts regen 12dd2af, sv#77 closed, hub #41 closed→Released). Supersedes the 07-18 list. NEXT SESSION FOCUS (Jeremy's words: "publish blog + more high-level roadmap planning"): 1. Publish blog Diary #7 (hub #22, blog PR#9) — prose near-final, backed up @4291a30 (obotclaw) with new qt-explorer-demo.gif + verified stats (hep 176M/$143, QT 308M/$241). Remaining: final title + #7-vs-#8 numbering call, publish per [[blog-site-gotchas]] (no leading heading, keynote card), close PR#9. 2. High-level roadmap planning (hub #10 keynote requirement) — the 07-19 decisions unblocked: keynote-plan report on hub (harness-proposal style); open.gismo plan update → #34 (fold ratified D1=GitHub-prerequisite/D2/D6; propose D3 mapping + D4 Shiny-vs-webR resolutions in the draft) → Phase 1–4 hub Requirements for Jeremy's approval → og PR#1 review; #18 Design section (3 lanes: rollup/responder/dev, GHA under obotclaw, gates + kill switches); K4 per-repo standing-grant definitions; board re-milestone pass. Queued agent work (approved 07-19): gs PR#39 CI fix (2 infra: workflow-template drift + oldrel R 4.3.3 install fail; release R green) → then Jeremy's merge+TAG gate (hub #28, suggest e2e report render before tag); safety.viz-release skill draft (+e2e-fixture bump step); nep #35 pre-flight (Design + sv impl issue) → ⚡️ Phase-1 KDIGO scatter (D1=RhoInc+eGFR, D2=P1 standalone, D3=defer animation). Carried gates/admin: og PR#1 (after plan update); obotclaw installs (open.gismo + jwildfire.github.io); Gilead PR#151; hub #3 §7 credential retirement; LinkedIn post; deletions approval (stale dist/safety.viz-1.3.0, stale hub worktree); gs PR#29 stale-draft triage (close or revive). Note: 07-19 board state: #36 Released (#37 tracks QT P2), #41 Released/closed. K2–K4 + #34 D1/D2/D6 + #18 slate all recorded on their issues — see [[keynote-plan]], [[open-gismo-v1-workstream]].
last diary (2026-07-19.md)
1. Publish blog Diary #7 (hub #22) — commit/push the worktree, final title/numbering call, publish per the blog flow (no leading heading; keynote card).
2. High-level roadmap planning — the follow-ons the K2–K4 + #34 + #18 decisions unblocked: keynote-plan report on the hub (hub #10), open.gismo plan update → #34 → Phase 1–4 Requirements for approval, #18 Design section, K4 per-repo standing-grant definitions, board re-milestone pass.
3. Carried merge gates: gs PR #39 merge + tag once the CI fix lands; og PR #1 after the plan update.
4. Queued agent work: gs #39 CI fix; safety.viz-release skill draft; nep #35 pre-flight (Design + sv issue) → ⚡️ Phase-1 build.
frozen operational record · pairs with diary/2026-07-19.md · boundary: session-init marker @ 09:00 (9:00 AM) · session-hub (obot.agent v0.2 · #24)